Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_019164
View in Genome Browser
Position
CM027578.1:7266530-7270679 (-)
4149bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the actin family
Organism
Populus deltoides
Also AS Podel.09G061900AT3G60830Potri.009G060200.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_030130 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
gene-H0E87_025630 SWI SNF complex component SNF12 homolog
gene-H0E87_023459 SWI SNF complex component SNF12 homolog
Regulatory gene
gene-H0E87_001144 Cyclic dof factor
gene-H0E87_001832 Dof zinc finger protein
gene-H0E87_001933 Dof zinc finger protein DOF4.6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0005198 structural molecule activity MF
GO:0005200 structural constituent of cytoskeleton MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0006325 chromatin organization BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009793 embryo development ending in seed dormancy BP
GO:0009838 abscission BP
GO:0009908 flower development BP
GO:0009987 cellular process BP
GO:0010154 fruit development BP
GO:0010227 floral organ abscission BP
GO:0016043 cellular component organization BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048316 seed development BP
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0051276 chromosome organization BP
GO:0061458 reproductive system development BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090567 reproductive shoot system development BP
GO:0099402 plant organ development BP