Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_019335
View in Genome Browser
Position
CM027578.1:6594850-6598561 (-)
3711bp
Gene Type
gene
Gene Description (Protein Product)
Trafficking protein particle complex subunit
Organism
Populus deltoides
Also AS Podel.09G071800AT5G02280Potri.009G069800.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_022687 Trafficking protein particle complex subunit
gene-H0E87_024582 Trafficking protein particle complex subunit
gene-H0E87_029000 Sedlin, N-terminal conserved region
Regulatory gene
gene-H0E87_001144 Cyclic dof factor
gene-H0E87_001635 MADS-box transcription factor
gene-H0E87_001654 GAGA binding protein-like family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005085 guanyl-nucleotide exchange factor activity MF
GO:0005088 guanyl-nucleotide exchange factor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0006810 transport BP
GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport BP
GO:0008150 biological_process BP
GO:0016192 vesicle-mediated transport BP
GO:0017016 small GTPase binding MF
GO:0017112 guanyl-nucleotide exchange factor activity MF
GO:0017137 small GTPase binding MF
GO:0019899 enzyme binding MF
GO:0030008 TRAPP complex CC
GO:0031267 small GTPase binding MF
GO:0032991 protein-containing complex CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0046907 intracellular transport BP
GO:0048193 Golgi vesicle transport BP
GO:0051020 GTPase binding MF
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0065007 biological regulation BP
GO:0065009 regulation of molecular function BP
GO:0098772 molecular function regulator activity MF
GO:0099023 vesicle tethering complex CC