Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_023971
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Position
CM027570.1:23467596-23473880 (+)
6284bp
Gene Type
gene
Gene Description (Protein Product)
Methylmalonate-semialdehyde dehydrogenase
Organism
Populus deltoides
Also AS Podel.01G300200AT2G14170Potri.001G283100.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_025692 Belongs to the 3-hydroxyisobutyrate dehydrogenase family
gene-H0E87_027569 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA
gene-H0E87_030553 Carboxyl transferase domain
Regulatory gene
gene-H0E87_000145 NAC domain-containing protein
gene-H0E87_000364 GATA transcription factor
gene-H0E87_000534 NAC transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005507 copper ion binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0008150 biological_process BP
GO:0043167 ion binding MF
GO:0043169 cation binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0050896 response to stimulus BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00640 Propanoate metabolism -
map00562 Inositol phosphate metabolism -
map00410 beta-Alanine metabolism -
map00280 Valine, leucine and isoleucine degradation -