Basic Information
Gene ID
gene-H0E87_024838
Position
CM027570.1:27624236-27626878 (-)
2642bp
Gene Type
gene
Gene Description (Protein Product)
Helicase associated domain (HA2) Add an annotation
Organism
Also AS Podel.17G052400AT5G10370Potri.017G050100.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_027789 cell division cycle 5-like
gene-H0E87_026857 Crooked neck-like protein
gene-H0E87_028790 Crooked neck-like protein
Regulatory gene
gene-H0E87_000364 GATA transcription factor
gene-H0E87_000789 ZF-HD protein dimerisation region
gene-H0E87_001100 ZF-HD protein dimerisation region

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.