PPGR - Gene Detail

Gene ID	gene-H0E87_025822 View in Genome Browser
Position	CM027570.1:40600681-40602348 (+) 1667bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Organism	Populus deltoides
Also AS	Podel.01G156800AT2G35380Potri.001G145800.v4.1

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)

gene-H0E87_030687 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

gene-H0E87_032101 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

gene-H0E87_031731 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Regulatory gene

gene-H0E87_000358 Belongs to the GRAS family

gene-H0E87_000789 ZF-HD protein dimerisation region

gene-H0E87_001100 ZF-HD protein dimerisation region

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00940	Phenylpropanoid biosynthesis	Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.