Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_025925
View in Genome Browser
Position
CM027570.1:44841308-44846725 (-)
5417bp
Gene Type
gene
Gene Description (Protein Product)
Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi trans-Golgi network (TGN) and or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules
Organism
Populus deltoides
Also AS Podel.01G107400AT4G23460Potri.001G101400.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_029378 Belongs to the adaptor complexes medium subunit family
gene-H0E87_026076 Clathrin is the major protein of the polyhedral coat of coated pits and vesicles
gene-H0E87_028541 Protein of unknown function (DUF1681)
Regulatory gene
gene-H0E87_000273 B3 domain-containing
gene-H0E87_000658 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
gene-H0E87_001144 Cyclic dof factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0009506 plasmodesma CC
GO:0016020 membrane CC
GO:0030054 cell junction CC
GO:0044464 obsolete cell part CC
GO:0055044 symplast CC
GO:0071944 cell periphery CC