Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
gene-H0E87_026056
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Position
CM027570.1:17661515-17665649 (+)
4134bp
Gene Type
gene
Gene Description (Protein Product)
"Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex
Organism
Populus deltoides
Also AS Podel.01G350300AT3G27100Potri.001G330400.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_027104 Transcription initiation factor TFIID subunit
gene-H0E87_030637 Transcription initiation factor TFIID subunit
gene-H0E87_029492 Transcription initiation factor TFIID subunit
Regulatory gene
gene-H0E87_000273 B3 domain-containing
gene-H0E87_001144 Cyclic dof factor
gene-H0E87_001430 B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)