Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_028806
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Position
CM027572.1:6877324-6878012 (+)
688bp
Gene Type
gene
Gene Description (Protein Product)
NAD(P)H dehydrogenase subunit S
Organism
Populus deltoides
Also AS Podel.T288900AT4G23890Potri.003G140400.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_029554 PGR5-like protein 1A
gene-H0E87_031704 Ribosomal protein S1-like RNA-binding domain
gene-H0E87_028904 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Regulatory gene
gene-H0E87_000145 NAC domain-containing protein
gene-H0E87_000273 B3 domain-containing
gene-H0E87_000534 NAC transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006091 generation of precursor metabolites and energy BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009507 chloroplast CC
GO:0009534 chloroplast thylakoid CC
GO:0009535 chloroplast thylakoid membrane CC
GO:0009536 plastid CC
GO:0009579 thylakoid CC
GO:0009767 photosynthetic electron transport chain BP
GO:0009987 cellular process BP
GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone) CC
GO:0015979 photosynthesis BP
GO:0016020 membrane CC
GO:0019684 photosynthesis, light reaction BP
GO:0022900 electron transport chain BP
GO:0031976 plastid thylakoid CC
GO:0031984 organelle subcompartment CC
GO:0032991 protein-containing complex CC
GO:0034357 photosynthetic membrane CC
GO:0042651 thylakoid membrane CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044436 obsolete thylakoid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0055035 plastid thylakoid membrane CC
GO:0055114 obsolete oxidation-reduction process BP
GO:0098796 membrane protein complex CC