Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_028885
View in Genome Browser
Position
CM027572.1:880733-882492 (+)
1759bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Organism
Populus deltoides
Also AS Podel.03G233400AT5G19890Potri.003G214500.v4.1

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_030687 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family
gene-H0E87_031731 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family
gene-H0E87_032101 Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family
Regulatory gene
gene-H0E87_000172 Trihelix transcription factor
gene-H0E87_000266 transcription factor
gene-H0E87_000268 ethylene-responsive transcription factor

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00940 Phenylpropanoid biosynthesis Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.