Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_028949
View in Genome Browser
Position
CM027572.1:9444683-9452045 (+)
7362bp
Gene Type
gene
Gene Description (Protein Product)
Structural maintenance of chromosomes protein
Organism
Populus deltoides
Also AS Podel.03G114700AT5G62410Potri.003G108400.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_030712 Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes
gene-H0E87_030604 DNA replication ATP-dependent helicase nuclease
gene-H0E87_030171 Callose synthase
Regulatory gene
gene-H0E87_000172 Trihelix transcription factor
gene-H0E87_000364 GATA transcription factor
gene-H0E87_000658 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000793 condensed chromosome CC
GO:0000796 condensin complex CC
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005694 chromosome CC
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044815 DNA packaging complex CC