Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_029216
View in Genome Browser
Position
CM027572.1:5095844-5097667 (-)
1823bp
Gene Type
gene
Gene Description (Protein Product)
"Possible membrane-associated motif in LPS-induced tumor necrosis factor alpha factor (LITAF)
Organism
Populus deltoides
Also AS Podel.03G177500AT5G13190Potri.003G165900.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_029912 Belongs to the syntaxin family
gene-H0E87_032073 RING finger and CHY zinc finger domain-containing protein
gene-H0E87_030265 Protein of unknown function (DUF1644)
Regulatory gene
gene-H0E87_001144 Cyclic dof factor
gene-H0E87_001635 MADS-box transcription factor
gene-H0E87_001654 GAGA binding protein-like family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0002682 regulation of immune system process BP
GO:0002683 negative regulation of immune system process BP
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0008150 biological_process BP
GO:0010363 regulation of plant-type hypersensitive response BP
GO:0010941 regulation of cell death BP
GO:0016020 membrane CC
GO:0031347 regulation of defense response BP
GO:0031348 negative regulation of defense response BP
GO:0034051 negative regulation of plant-type hypersensitive response BP
GO:0043067 regulation of programmed cell death BP
GO:0043069 negative regulation of programmed cell death BP
GO:0044464 obsolete cell part CC
GO:0045088 regulation of innate immune response BP
GO:0045824 negative regulation of innate immune response BP
GO:0048519 negative regulation of biological process BP
GO:0048523 negative regulation of cellular process BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0050776 regulation of immune response BP
GO:0050777 negative regulation of immune response BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0060548 negative regulation of cell death BP
GO:0065007 biological regulation BP
GO:0071944 cell periphery CC
GO:0080134 regulation of response to stress BP
GO:0080135 regulation of cellular response to stress BP