Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_029310
View in Genome Browser
Position
CM027572.1:12812425-12821167 (-)
8742bp
Gene Type
gene
Gene Description (Protein Product)
pumilio homolog
Organism
Populus deltoides
Also AS Podel.03G075400AT1G72320Potri.003G073000.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_031334 Protein ROOT INITIATION DEFECTIVE 3
gene-H0E87_029750 tRNA (cytosine-5-)-methyltransferase activity
gene-H0E87_031704 Ribosomal protein S1-like RNA-binding domain
Regulatory gene
gene-H0E87_000116 Myb-related protein
gene-H0E87_000339 cell division cycle 5-like
gene-H0E87_000658 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005730 nucleolus CC
GO:0008150 biological_process BP
GO:0009743 response to carbohydrate BP
GO:0009744 response to sucrose BP
GO:0009746 response to hexose BP
GO:0009749 response to glucose BP
GO:0010033 response to organic substance BP
GO:0010252 auxin homeostasis BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0034284 response to monosaccharide BP
GO:0034285 response to disaccharide BP
GO:0042221 response to chemical BP
GO:0042592 homeostatic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0048878 chemical homeostasis BP
GO:0050896 response to stimulus BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070013 intracellular organelle lumen CC
GO:1901700 response to oxygen-containing compound BP