Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_029536
View in Genome Browser
Position
CM027572.1:5280356-5285498 (-)
5142bp
Gene Type
gene
Gene Description (Protein Product)
Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Organism
Populus deltoides
Also AS Podel.03G175600AT5G62000Potri.003G163600.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_029903 Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
gene-H0E87_031766 Protein TRANSPORT INHIBITOR RESPONSE
gene-H0E87_031262 Brassinazole-resistant
Regulatory gene
gene-H0E87_001144 Cyclic dof factor
gene-H0E87_001635 MADS-box transcription factor
gene-H0E87_001832 Dof zinc finger protein
Target gene
gene-H0E87_000287 Pentatricopeptide repeat-containing protein
gene-H0E87_000394 Transcription factor
gene-H0E87_000439 TMV resistance protein N-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map04075 Plant hormone signal transduction -