Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_029668
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Position
CM027572.1:14242140-14248556 (-)
6416bp
Gene Type
gene
Gene Description (Protein Product)
FAD binding domain of DNA photolyase
Organism
Populus deltoides
Also AS Podel.03G053800AT3G15620Potri.003G060000.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_030981 E3 ubiquitin-protein ligase
gene-H0E87_030890 CarD-like/TRCF domain
gene-H0E87_031694 CarD-like/TRCF domain
Regulatory gene
gene-H0E87_000364 GATA transcription factor
gene-H0E87_000658 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
gene-H0E87_000789 ZF-HD protein dimerisation region

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003913 DNA photolyase activity MF
GO:0003914 DNA (6-4) photolyase activity MF
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009411 response to UV BP
GO:0009416 response to light stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0016829 lyase activity MF
GO:0016830 carbon-carbon lyase activity MF
GO:0050896 response to stimulus BP
GO:0140097 catalytic activity, acting on DNA MF