Basic Information
Gene ID
gene-H0E87_030694
Position
CM027583.1:6865928-6874324 (-)
8396bp
Gene Type
gene
Gene Description (Protein Product)
Protein SUPPRESSOR OF PHYA-105
Organism
Also AS Podel.14G096700AT2G46340Potri.014G095300.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_030981 E3 ubiquitin-protein ligase
gene-H0E87_031029 DNA excision repair protein
gene-H0E87_030985 WD-40 repeat-containing protein
Regulatory gene
gene-H0E87_000297 helix loop helix domain
gene-H0E87_000301 Transcription factor UNE12-like
gene-H0E87_000413 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000151 ubiquitin ligase complex CC
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0006996 organelle organization BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009637 response to blue light BP
GO:0009639 response to red or far red light BP
GO:0009640 photomorphogenesis BP
GO:0009648 photoperiodism BP
GO:0009657 plastid organization BP
GO:0009658 chloroplast organization BP
GO:0009791 post-embryonic development BP
GO:0009987 cellular process BP
GO:0010017 red or far-red light signaling pathway BP
GO:0010099 regulation of photomorphogenesis BP
GO:0010100 negative regulation of photomorphogenesis BP
GO:0010114 response to red light BP
GO:0010218 response to far red light BP
GO:0010228 vegetative to reproductive phase transition of meristem BP
GO:0016043 cellular component organization BP
GO:0016604 nuclear body CC
GO:0022414 reproductive process BP
GO:0023052 signaling BP
GO:0031461 cullin-RING ubiquitin ligase complex CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032991 protein-containing complex CC
GO:0042802 identical protein binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044451 obsolete nucleoplasm part CC
GO:0044464 obsolete cell part CC
GO:0048519 negative regulation of biological process BP
GO:0048572 short-day photoperiodism BP
GO:0048573 photoperiodism, flowering BP
GO:0048575 short-day photoperiodism, flowering BP
GO:0048580 regulation of post-embryonic development BP
GO:0048581 negative regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0048608 reproductive structure development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051093 negative regulation of developmental process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051241 negative regulation of multicellular organismal process BP
GO:0051716 cellular response to stimulus BP
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0071214 cellular response to abiotic stimulus BP
GO:0071478 cellular response to radiation BP
GO:0071482 cellular response to light stimulus BP
GO:0071489 cellular response to red or far red light BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080008 Cul4-RING E3 ubiquitin ligase complex CC
GO:0104004 cellular response to environmental stimulus BP
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC
GO:2000026 regulation of multicellular organismal development BP
GO:2000028 regulation of photoperiodism, flowering BP
GO:2000030 regulation of response to red or far red light BP
GO:2000241 regulation of reproductive process BP
KEGG Term Name Description
map04712 Circadian rhythm - plant -