PPGR - Gene Detail

Basic Information

Gene ID	gene-H0E87_031272 View in Genome Browser
Position	CM027583.1:4305192-4309745 (+) 4553bp
Gene Type	gene
Gene Description (Protein Product)	Carotenoid cleavage dioxygenase 7
Organism	Populus deltoides
Also AS	Podel.14G060700AT2G44990Potri.014G056800.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-H0E87_031459 Phospholipase A(1) DAD1

gene-H0E87_031751 Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1 NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1

gene-H0E87_032013 Thylakoid membrane phosphoprotein 14 kDa

Regulatory gene

gene-H0E87_001144 Cyclic dof factor

gene-H0E87_001832 Dof zinc finger protein

gene-H0E87_001933 Dof zinc finger protein DOF4.6-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0001763	morphogenesis of a branching structure	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0006629	lipid metabolic process	BP
GO:0006714	sesquiterpenoid metabolic process	BP
GO:0006720	isoprenoid metabolic process	BP
GO:0006721	terpenoid metabolic process	BP
GO:0007275	multicellular organism development	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008299	isoprenoid biosynthetic process	BP
GO:0008300	isoprenoid catabolic process	BP
GO:0008610	lipid biosynthetic process	BP
GO:0009056	catabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009733	response to auxin	BP
GO:0009987	cellular process	BP
GO:0010016	shoot system morphogenesis	BP
GO:0010033	response to organic substance	BP
GO:0010223	secondary shoot formation	BP
GO:0010346	shoot axis formation	BP
GO:0010436	carotenoid dioxygenase activity	MF
GO:0010817	regulation of hormone levels	BP
GO:0016042	lipid catabolic process	BP
GO:0016106	sesquiterpenoid biosynthetic process	BP
GO:0016114	terpenoid biosynthetic process	BP
GO:0016119	carotene metabolic process	BP
GO:0016121	carotene catabolic process	BP
GO:0016491	oxidoreductase activity	MF
GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	MF
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	MF
GO:0018130	heterocycle biosynthetic process	BP
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0042214	terpene metabolic process	BP
GO:0042221	response to chemical	BP
GO:0042445	hormone metabolic process	BP
GO:0042446	hormone biosynthetic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044242	cellular lipid catabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0045549	9-cis-epoxycarotenoid dioxygenase activity	MF
GO:0046247	terpene catabolic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0048367	shoot system development	BP
GO:0048646	anatomical structure formation involved in morphogenesis	BP
GO:0048731	system development	BP
GO:0048856	anatomical structure development	BP
GO:0050896	response to stimulus	BP
GO:0051213	dioxygenase activity	MF
GO:0055114	obsolete oxidation-reduction process	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0071704	organic substance metabolic process	BP
GO:1901334	lactone metabolic process	BP
GO:1901336	lactone biosynthetic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1901576	organic substance biosynthetic process	BP
GO:1901600	strigolactone metabolic process	BP
GO:1901601	strigolactone biosynthetic process	BP
GO:1905393	plant organ formation	BP

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map00906	Carotenoid biosynthesis	-