Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_031550
View in Genome Browser
Position
CM027583.1:12559732-12563784 (+)
4052bp
Gene Type
gene
Gene Description (Protein Product)
lipid-A-disaccharide synthase
Organism
Populus deltoides
Also AS Podel.14G170200AT2G04560Potri.014G160300.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_031823 acetate--CoA ligase ACS, chloroplastic
gene-H0E87_031643 Aspartokinase
gene-H0E87_031905 Carrier of the growing fatty acid chain in fatty acid biosynthesis
Regulatory gene
gene-H0E87_001144 Cyclic dof factor
gene-H0E87_001832 Dof zinc finger protein
gene-H0E87_001933 Dof zinc finger protein DOF4.6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005543 phospholipid binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005829 cytosol CC
GO:0005975 carbohydrate metabolic process BP
GO:0006040 amino sugar metabolic process BP
GO:0006629 lipid metabolic process BP
GO:0006643 membrane lipid metabolic process BP
GO:0006644 phospholipid metabolic process BP
GO:0006664 glycolipid metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008194 UDP-glycosyltransferase activity MF
GO:0008289 lipid binding MF
GO:0008610 lipid biosynthetic process BP
GO:0008654 phospholipid biosynthetic process BP
GO:0008915 lipid-A-disaccharide synthase activity MF
GO:0009058 biosynthetic process BP
GO:0009245 lipid A biosynthetic process BP
GO:0009247 glycolipid biosynthetic process BP
GO:0009311 oligosaccharide metabolic process BP
GO:0009312 oligosaccharide biosynthetic process BP
GO:0009987 cellular process BP
GO:0016051 carbohydrate biosynthetic process BP
GO:0016740 transferase activity MF
GO:0016757 glycosyltransferase activity MF
GO:0016758 hexosyltransferase activity MF
GO:0019637 organophosphate metabolic process BP
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044255 cellular lipid metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046467 membrane lipid biosynthetic process BP
GO:0046493 lipid A metabolic process BP
GO:0071704 organic substance metabolic process BP
GO:0090407 organophosphate biosynthetic process BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901269 lipooligosaccharide metabolic process BP
GO:1901271 lipooligosaccharide biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1903509 liposaccharide metabolic process BP
GO:2001289 lipid X metabolic process BP
KEGG Term Name Description
map01100 Metabolic pathways -