Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_031581
View in Genome Browser
Position
CM027583.1:11938999-11940407 (+)
1408bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the ATG8 family
Organism
Populus deltoides
Also AS Podel.T185800AT2G05630Potri.014G153800.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_031908 Serine threonine-protein kinase
gene-H0E87_031847 Peroxisome biogenesis protein
gene-H0E87_031788 WD repeat domain phosphoinositide-interacting protein
Regulatory gene
gene-H0E87_000658 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
gene-H0E87_001161 Protein ALWAYS EARLY
gene-H0E87_001189 Myb-related protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0006950 response to stress BP
GO:0006995 cellular response to nitrogen starvation BP
GO:0007154 cell communication BP
GO:0008150 biological_process BP
GO:0009267 cellular response to starvation BP
GO:0009605 response to external stimulus BP
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0033554 cellular response to stress BP
GO:0042594 response to starvation BP
GO:0043562 cellular response to nitrogen levels BP
GO:0050896 response to stimulus BP
GO:0051716 cellular response to stimulus BP
GO:0071496 cellular response to external stimulus BP