Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_031620
View in Genome Browser
Position
CM027583.1:4354621-4357731 (+)
3110bp
Gene Type
gene
Gene Description (Protein Product)
SBP domain
Organism
Populus deltoides
Also AS Podel.14G061600AT1G02065Potri.014G057700.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_031966 4Fe-4S single cluster domain of Ferredoxin I
Regulatory gene
gene-H0E87_000658 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
gene-H0E87_001161 Protein ALWAYS EARLY
gene-H0E87_001189 Myb-related protein
Target gene
gene-H0E87_000281 NPH3 family
gene-H0E87_000319 DEAD DEAH box RNA helicase family protein
gene-H0E87_000373

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0003676 nucleic acid binding MF
GO:0003677 DNA binding MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0007049 cell cycle BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009553 embryo sac development BP
GO:0009554 megasporogenesis BP
GO:0009555 pollen development BP
GO:0009556 microsporogenesis BP
GO:0009791 post-embryonic development BP
GO:0009908 flower development BP
GO:0009987 cellular process BP
GO:0019953 sexual reproduction BP
GO:0022402 cell cycle process BP
GO:0022414 reproductive process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0034293 sexual sporulation BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043934 sporulation BP
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0048229 gametophyte development BP
GO:0048236 plant-type sporogenesis BP
GO:0048367 shoot system development BP
GO:0048437 floral organ development BP
GO:0048438 floral whorl development BP
GO:0048443 stamen development BP
GO:0048466 androecium development BP
GO:0048608 reproductive structure development BP
GO:0048653 anther development BP
GO:0048731 system development BP
GO:0048827 phyllome development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0051321 meiotic cell cycle BP
GO:0051704 obsolete multi-organism process BP
GO:0061458 reproductive system development BP
GO:0090567 reproductive shoot system development BP
GO:0097159 organic cyclic compound binding MF
GO:0099402 plant organ development BP
GO:1901363 heterocyclic compound binding MF
GO:1903046 meiotic cell cycle process BP