Basic Information
Gene ID
gene-H0E87_031656
Position
CM027583.1:10970860-10981257 (-)
10397bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the chalcone stilbene synthases family
Organism
Also AS Podel.14G152900AT5G13930Potri.014G145100.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-H0E87_031965 Belongs to the ubiquitin-conjugating enzyme family
gene-H0E87_031750 Belongs to the chalcone stilbene synthases family
gene-H0E87_031837 Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
Regulatory gene
gene-H0E87_001144 Cyclic dof factor
gene-H0E87_001832 Dof zinc finger protein
gene-H0E87_001933 Dof zinc finger protein DOF4.6-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map04712 Circadian rhythm - plant -
map01110 Biosynthesis of secondary metabolites -
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00960 Tropane, piperidine and pyridine alkaloid biosynthesis -
map00941 Flavonoid biosynthesis Flavonoids are a major class of plant secondary metabolites that serves a multitude of functions including pigments and antioxidant activity. Flavonoids are synthesized from phenylpropanoid derivatives by condensation with malonyl-CoA. For example, condensation of p-coumaroyl-CoA (C6-C3) with three malonyl-CoA (C3) molecules results in naringenin chalcone with a diphenylpropane (C6-C3-C6) unit, which is converted to naringenin with the flavone (2-phenylchromen-4-one) backbone by conjugate ring closure. These and further modifications yield a variety of structural forms including chalcones, flavanones, dihyroflavonols, and flavans, anthocyanins, flavones and flavonols, and isoflavonoids.