Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-H0E87_031761
View in Genome Browser
Position
CM027583.1:7085572-7094794 (+)
9222bp
Gene Type
gene
Gene Description (Protein Product)
isoform X1
Organism
Populus deltoides
Also AS Podel.14G099200AT3G61690Potri.014G097600.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Regulatory gene
gene-H0E87_000116 Myb-related protein
gene-H0E87_000339 cell division cycle 5-like
gene-H0E87_000747 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004652 polynucleotide adenylyltransferase activity MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005730 nucleolus CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006396 RNA processing BP
GO:0006399 tRNA metabolic process BP
GO:0006401 RNA catabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0016070 RNA metabolic process BP
GO:0016072 rRNA metabolic process BP
GO:0016074 sno(s)RNA metabolic process BP
GO:0016075 rRNA catabolic process BP
GO:0016077 sno(s)RNA catabolic process BP
GO:0016078 tRNA catabolic process BP
GO:0016740 transferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0016779 nucleotidyltransferase activity MF
GO:0019439 aromatic compound catabolic process BP
GO:0031123 RNA 3'-end processing BP
GO:0031499 TRAMP complex CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034655 nucleobase-containing compound catabolic process BP
GO:0034660 ncRNA metabolic process BP
GO:0034661 ncRNA catabolic process BP
GO:0043021 ribonucleoprotein complex binding MF
GO:0043023 ribosomal large subunit binding MF
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043629 ncRNA polyadenylation BP
GO:0043630 ncRNA polyadenylation involved in polyadenylation-dependent ncRNA catabolic process BP
GO:0043631 RNA polyadenylation BP
GO:0043632 modification-dependent macromolecule catabolic process BP
GO:0043633 polyadenylation-dependent RNA catabolic process BP
GO:0043634 polyadenylation-dependent ncRNA catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044270 cellular nitrogen compound catabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044877 protein-containing complex binding MF
GO:0046483 heterocycle metabolic process BP
GO:0046700 heterocycle catabolic process BP
GO:0070013 intracellular organelle lumen CC
GO:0070566 adenylyltransferase activity MF
GO:0071025 RNA surveillance BP
GO:0071027 nuclear RNA surveillance BP
GO:0071029 nuclear ncRNA surveillance BP
GO:0071035 nuclear polyadenylation-dependent rRNA catabolic process BP
GO:0071046 nuclear polyadenylation-dependent ncRNA catabolic process BP
GO:0071704 organic substance metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901361 organic cyclic compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1990817 RNA adenylyltransferase activity MF