PPGR - Gene Detail

Basic Information

Gene ID	gene-H0E87_032090 View in Genome Browser
Position	CM027583.1:449308-451776 (+) 2468bp
Gene Type	gene
Gene Description (Protein Product)	Organic cation carnitine transporter
Organism	Populus deltoides
Also AS	Podel.14G001800AT3G13050Potri.014G000800.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Regulatory gene

gene-H0E87_000658 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains

gene-H0E87_000789 ZF-HD protein dimerisation region

gene-H0E87_001100 ZF-HD protein dimerisation region

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005215	transporter activity	MF
GO:0005342	organic acid transmembrane transporter activity	MF
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0006810	transport	BP
GO:0006811	monoatomic ion transport	BP
GO:0006812	monoatomic cation transport	BP
GO:0006820	monoatomic anion transport	BP
GO:0006855	xenobiotic transmembrane transport	BP
GO:0008028	monocarboxylic acid transmembrane transporter activity	MF
GO:0008150	biological_process	BP
GO:0008324	monoatomic cation transmembrane transporter activity	MF
GO:0008509	monoatomic anion transmembrane transporter activity	MF
GO:0008514	organic anion transmembrane transporter activity	MF
GO:0008519	ammonium transmembrane transporter activity	MF
GO:0015075	monoatomic ion transmembrane transporter activity	MF
GO:0015101	organic cation transmembrane transporter activity	MF
GO:0015238	xenobiotic transmembrane transporter activity	MF
GO:0015318	inorganic molecular entity transmembrane transporter activity	MF
GO:0015651	quaternary ammonium group transmembrane transporter activity	MF
GO:0015695	organic cation transport	BP
GO:0015696	ammonium transmembrane transport	BP
GO:0015697	quaternary ammonium group transport	BP
GO:0015711	organic anion transport	BP
GO:0015718	monocarboxylic acid transport	BP
GO:0015849	organic acid transport	BP
GO:0015893	xenobiotic transport	BP
GO:0016020	membrane	CC
GO:0016021	membrane	CC
GO:0022857	transmembrane transporter activity	MF
GO:0031224	obsolete intrinsic component of membrane	CC
GO:0034220	monoatomic ion transmembrane transport	BP
GO:0035461	vitamin transmembrane transport	BP
GO:0042221	response to chemical	BP
GO:0042493	response to xenobiotic stimulus	BP
GO:0044425	obsolete membrane part	CC
GO:0044464	obsolete cell part	CC
GO:0046942	carboxylic acid transport	BP
GO:0046943	carboxylic acid transmembrane transporter activity	MF
GO:0050896	response to stimulus	BP
GO:0051179	localization	BP
GO:0051180	vitamin transport	BP
GO:0051234	establishment of localization	BP
GO:0055085	transmembrane transport	BP
GO:0071702	organic substance transport	BP
GO:0071705	nitrogen compound transport	BP
GO:0071944	cell periphery	CC
GO:0072488	ammonium transmembrane transport	BP
GO:0090416	nicotinate transmembrane transporter activity	MF
GO:0090417	N-methylnicotinate transmembrane transporter activity	MF
GO:0090482	vitamin transmembrane transporter activity	MF
GO:0098655	monoatomic cation transmembrane transport	BP
GO:0098656	monoatomic anion transmembrane transport	BP
GO:1903825	organic acid transmembrane transport	BP
GO:1905039	carboxylic acid transmembrane transport	BP
GO:2001142	nicotinate transport	BP
GO:2001143	N-methylnicotinate transport	BP