PPGR - Gene Detail

Basic Information

Gene ID	gene-KQ03_p018 View in Genome Browser
Position	NC_024747.1:112643-114925 (-) 2282bp
Gene Type	gene
Gene Description (Protein Product)	"NDH shuttles electrons from NAD(P)H plastoquinone
Organism	Populus euphratica
Also AS	Potri.001G342933ATCG01010Potri.001G342933.v4.1

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-KQ03_p021 NDH shuttles electrons from NAD(P)H plastoquinone, via FMN and iron-sulfur (Fe-S) centers, to quinones in the photosynthetic chain and possibly in a chloroplast respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient

gene-KQ03_p087 Photosynthetic reaction centre protein

gene-LOC105126350

Regulatory gene

gene-LOC105107409 Myb/SANT-like DNA-binding domain

gene-LOC105107464 B3 domain-containing transcription factor

gene-LOC105107546 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00190	Oxidative phosphorylation	-