Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC105107276
View in Genome Browser
Position
NW_011499847.1:3236892-3241745 (+)
4853bp
Gene Type
gene
Gene Description (Protein Product)
E3 ubiquitin-protein ligase
Organism
Populus euphratica
Also AS Potri.T124304AT4G34370Potri.T124304.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105134263 Topless-related protein
gene-LOC105125127 Topless-related protein
gene-LOC105139934 Topless-related protein
Regulatory gene
gene-LOC105107387 Belongs to the GRAS family
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107567 Belongs to the GRAS family

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000151 ubiquitin ligase complex CC
GO:0000209 protein polyubiquitination BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004842 ubiquitin-protein transferase activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009894 regulation of catabolic process BP
GO:0009896 positive regulation of catabolic process BP
GO:0009987 cellular process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0016567 protein ubiquitination BP
GO:0016740 transferase activity MF
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0019787 ubiquitin-like protein transferase activity MF
GO:0019899 enzyme binding MF
GO:0030162 regulation of proteolysis BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031329 regulation of cellular catabolic process BP
GO:0031331 positive regulation of cellular catabolic process BP
GO:0031624 ubiquitin conjugating enzyme binding MF
GO:0032268 regulation of protein metabolic process BP
GO:0032270 positive regulation of protein metabolic process BP
GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process BP
GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process BP
GO:0032446 protein modification by small protein conjugation BP
GO:0032991 protein-containing complex CC
GO:0036211 protein modification process BP
GO:0042176 regulation of protein catabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044390 ubiquitin-like protein conjugating enzyme binding MF
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0045732 positive regulation of protein catabolic process BP
GO:0045862 positive regulation of proteolysis BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051246 regulation of protein metabolic process BP
GO:0051247 positive regulation of protein metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061136 regulation of proteasomal protein catabolic process BP
GO:0061630 ubiquitin protein ligase activity MF
GO:0061659 ubiquitin-like protein ligase activity MF
GO:0065007 biological regulation BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071704 organic substance metabolic process BP
GO:0080090 regulation of primary metabolic process BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901800 positive regulation of proteasomal protein catabolic process BP
GO:1902494 catalytic complex CC
GO:1903050 regulation of proteolysis involved in protein catabolic process BP
GO:1903052 positive regulation of proteolysis involved in protein catabolic process BP
GO:1903362 regulation of protein catabolic process BP
GO:1903364 positive regulation of protein catabolic process BP
GO:1990234 transferase complex CC
GO:2000058 regulation of ubiquitin-dependent protein catabolic process BP
GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process BP