Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC105121707
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Position
NW_011499852.1:257063-258535 (+)
1472bp
Gene Type
gene
Gene Description (Protein Product)
ZINC FINGER protein
Organism
Populus euphratica
Also AS Potri.006G124100AT2G36930Potri.006G124100.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105134326 Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits
gene-LOC105142737 Ribosome biogenesis regulatory protein
gene-LOC105128384 Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit
Regulatory gene
gene-LOC105107464 B3 domain-containing transcription factor
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107871 B3 domain-containing protein Os01g0234100-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000054 ribosomal subunit export from nucleus BP
GO:0000055 ribosomal large subunit export from nucleus BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005575 cellular_component CC
GO:0006403 RNA localization BP
GO:0006405 RNA export from nucleus BP
GO:0006611 protein export from nucleus BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006913 nucleocytoplasmic transport BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0015931 nucleobase-containing compound transport BP
GO:0022613 ribonucleoprotein complex biogenesis BP
GO:0030684 preribosome CC
GO:0030687 preribosome, large subunit precursor CC
GO:0031503 protein-containing complex localization BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033750 ribosome localization BP
GO:0034613 protein localization BP
GO:0042254 ribosome biogenesis BP
GO:0042886 amide transport BP
GO:0043021 ribonucleoprotein complex binding MF
GO:0043023 ribosomal large subunit binding MF
GO:0044085 cellular component biogenesis BP
GO:0044877 protein-containing complex binding MF
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0050657 nucleic acid transport BP
GO:0050658 RNA transport BP
GO:0051168 nuclear export BP
GO:0051169 nuclear transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051236 establishment of RNA localization BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051656 establishment of organelle localization BP
GO:0070727 cellular macromolecule localization BP
GO:0071166 ribonucleoprotein complex localization BP
GO:0071426 obsolete ribonucleoprotein complex export from nucleus BP
GO:0071428 obsolete rRNA-containing ribonucleoprotein complex export from nucleus BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:1990904 ribonucleoprotein complex CC