Basic Information
Gene ID
gene-LOC105125645
Position
NW_011499864.1:368391-369575 (+)
1184bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the Psb28 family
Organism
Also AS Potri.002G256400AT4G28660Potri.002G256400.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105126501 oxygen-evolving enhancer protein
gene-LOC105127497 psbP-like protein 1
gene-LOC105126298 Thylakoid lumenal 19 kDa protein
Regulatory gene
gene-LOC105107499 Myb-like DNA-binding domain
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107622 Myb-like DNA-binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01100 Metabolic pathways -
map00195 Photosynthesis Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.