Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC105126439
View in Genome Browser
Position
NW_011499867.1:1569569-1582339 (-)
12770bp
Gene Type
gene
Gene Description (Protein Product)
E3 ubiquitin-protein ligase
Organism
Populus euphratica
Also AS Potri.007G081900AT2G22010Potri.007G081900.v4.1

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105127505 Ras-related protein
gene-LOC105138317 Rab subfamily of small GTPases
gene-LOC105139742 Ubiquitin carboxyl-terminal hydrolase
Regulatory gene
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107883 Dof zinc finger protein
gene-LOC105108074 Dof zinc finger protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004842 ubiquitin-protein transferase activity MF
GO:0006464 protein modification process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009615 response to virus BP
GO:0009987 cellular process BP
GO:0016567 protein ubiquitination BP
GO:0016740 transferase activity MF
GO:0019538 protein metabolic process BP
GO:0019787 ubiquitin-like protein transferase activity MF
GO:0030163 protein catabolic process BP
GO:0032446 protein modification by small protein conjugation BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043412 macromolecule modification BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051726 regulation of cell cycle BP
GO:0060154 obsolete cellular process regulating host cell cycle in response to virus BP
GO:0065007 biological regulation BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0071704 organic substance metabolic process BP
GO:0098586 cellular response to virus BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP