Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC105131257
View in Genome Browser
Position
NW_011499846.1:2528125-2535068 (-)
6943bp
Gene Type
gene
Gene Description (Protein Product)
SNF2 domain-containing protein CLASSY
Organism
Populus euphratica
Also AS Potri.014G050200AT1G05490Potri.014G050200.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105134453 SNF2 domain-containing protein CLASSY
gene-LOC105134667
gene-LOC105134667 SNF2 domain-containing protein CLASSY
Regulatory gene
gene-LOC105107464 B3 domain-containing transcription factor
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107871 B3 domain-containing protein Os01g0234100-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Pathway
KEGG Term Name Description
map03440 Homologous recombination Homologous recombination (HR) is essential for the accurate repair of DNA double-strand breaks (DSBs), potentially lethal lesions. HR takes place in the late S-G2 phase of the cell cycle and involves the generation of a single-stranded region of DNA, followed by strand invasion, formation of a Holliday junction, DNA synthesis using the intact strand as a template, branch migration and resolution. It is investigated that RecA/Rad51 family proteins play a central role. The breast cancer susceptibility protein Brca2 and the RecQ helicase BLM (Bloom syndrome mutated) are tumor suppressors that maintain genome integrity, at least in part, through HR.