PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC105133726 View in Genome Browser
Position	NW_011499909.1:384722-388759 (-) 4037bp
Gene Type	gene
Gene Description (Protein Product)	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
Organism	Populus euphratica
Also AS	Potri.001G060200AT5G13120Potri.001G060200.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC105141628 Small ubiquitin-related modifier

gene-LOC105142829 Histidine kinase

gene-LOC105142396 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

Regulatory gene

gene-LOC105107526 WRKY transcription factor

gene-LOC105107546 Dof zinc finger protein

gene-LOC105107883 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000413	protein peptidyl-prolyl isomerization	BP
GO:0003674	molecular_function	MF
GO:0003755	peptidyl-prolyl cis-trans isomerase activity	MF
GO:0003824	catalytic activity	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006464	protein modification process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009507	chloroplast	CC
GO:0009532	plastid stroma	CC
GO:0009533	chloroplast stromal thylakoid	CC
GO:0009534	chloroplast thylakoid	CC
GO:0009535	chloroplast thylakoid membrane	CC
GO:0009536	plastid	CC
GO:0009570	chloroplast stroma	CC
GO:0009579	thylakoid	CC
GO:0009987	cellular process	BP
GO:0010275	NAD(P)H dehydrogenase complex assembly	BP
GO:0016020	membrane	CC
GO:0016043	cellular component organization	BP
GO:0016853	isomerase activity	MF
GO:0016859	cis-trans isomerase activity	MF
GO:0018193	peptidyl-amino acid modification	BP
GO:0018208	peptidyl-proline modification	BP
GO:0019538	protein metabolic process	BP
GO:0019899	enzyme binding	MF
GO:0019900	kinase binding	MF
GO:0019901	protein kinase binding	MF
GO:0022607	cellular component assembly	BP
GO:0031976	plastid thylakoid	CC
GO:0031977	thylakoid lumen	CC
GO:0031984	organelle subcompartment	CC
GO:0034357	photosynthetic membrane	CC
GO:0034622	protein-containing complex assembly	BP
GO:0036211	protein modification process	BP
GO:0042651	thylakoid membrane	CC
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0043424	protein histidine kinase binding	MF
GO:0043933	protein-containing complex organization	BP
GO:0044085	cellular component biogenesis	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044436	obsolete thylakoid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0055035	plastid thylakoid membrane	CC
GO:0065003	protein-containing complex assembly	BP
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901564	organonitrogen compound metabolic process	BP