PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	gene-LOC105134000 View in Genome Browser
Position	NW_011499911.1:824225-826555 (+) 2330bp
Gene Type	gene
Gene Description (Protein Product)	Required for the assembly and or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits
Organism	Populus euphratica
Also AS	Potri.003G071200AT1G72370Potri.003G071200.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	gene-LOC105134220 Belongs to the eukaryotic ribosomal protein eS21 family gene-LOC105139568 Belongs to the universal ribosomal protein uS3 family gene-LOC105139801 ubiquitin-60S ribosomal protein
Regulatory gene	gene-LOC105107546 Dof zinc finger protein gene-LOC105107883 Dof zinc finger protein gene-LOC105108074 Dof zinc finger protein

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC

KEGG Term	Name	Description
map03010	Ribosome	-