Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC105134274
View in Genome Browser
Position
NW_011499913.1:887649-891880 (+)
4231bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the syntaxin family
Organism
Populus euphratica
Also AS Potri.005G020800AT5G26980Potri.005G020800.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105142576 Belongs to the syntaxin family
gene-LOC105142588 Belongs to the synaptobrevin family
gene-LOC105138232 Belongs to the syntaxin family
Regulatory gene
gene-LOC105107464 B3 domain-containing transcription factor
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107624 AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000139 Golgi membrane CC
GO:0000149 SNARE binding MF
GO:0002790 peptide secretion BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005768 endosome CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0006810 transport BP
GO:0006906 vesicle fusion BP
GO:0006996 organelle organization BP
GO:0007030 Golgi organization BP
GO:0007034 vacuolar transport BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0009306 protein secretion BP
GO:0009987 cellular process BP
GO:0010256 endomembrane system organization BP
GO:0012505 endomembrane system CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0022406 membrane docking BP
GO:0031090 organelle membrane CC
GO:0031201 SNARE complex CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031410 cytoplasmic vesicle CC
GO:0031982 vesicle CC
GO:0031984 organelle subcompartment CC
GO:0032588 trans-Golgi network membrane CC
GO:0032940 secretion by cell BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0042886 amide transport BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045184 establishment of protein localization BP
GO:0046903 secretion BP
GO:0048278 vesicle docking BP
GO:0048284 organelle fusion BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0090174 organelle membrane fusion BP
GO:0097708 intracellular vesicle CC
GO:0098588 bounding membrane of organelle CC
GO:0098791 Golgi apparatus subcompartment CC
GO:0098796 membrane protein complex CC
GO:0140056 organelle localization by membrane tethering BP
KEGG Term Name Description
map04130 SNARE interactions in vesicular transport -