PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	gene-LOC105135208 View in Genome Browser
Position	NW_011499922.1:240427-241141 (+) 714bp
Gene Type	gene
Gene Description (Protein Product)	Notch signaling pathway
Organism	Populus euphratica
Also AS	Potri.004G082900AT3G52640Potri.004G082900.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	gene-LOC105141512 subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors gene-LOC105141728 gene-LOC105141728 notchless protein
Regulatory gene	gene-LOC105107172 NAC domain-containing protein gene-LOC105107292 NAC transcription factor gene-LOC105107295 NAC domain-containing protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0000323	lytic vacuole	CC
GO:0000902	cell morphogenesis	BP
GO:0000904	cell morphogenesis involved in differentiation	BP
GO:0001654	eye development	BP
GO:0001745	compound eye morphogenesis	BP
GO:0001751	compound eye photoreceptor cell differentiation	BP
GO:0001754	eye photoreceptor cell differentiation	BP
GO:0001775	cell activation	BP
GO:0002252	immune effector process	BP
GO:0002262	myeloid cell homeostasis	BP
GO:0002263	cell activation involved in immune response	BP
GO:0002274	myeloid leukocyte activation	BP
GO:0002275	myeloid cell activation involved in immune response	BP
GO:0002283	neutrophil activation involved in immune response	BP
GO:0002366	leukocyte activation involved in immune response	BP
GO:0002376	immune system process	BP
GO:0002443	leukocyte mediated immunity	BP
GO:0002444	myeloid leukocyte mediated immunity	BP
GO:0002446	neutrophil mediated immunity	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004175	endopeptidase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005764	lysosome	CC
GO:0005765	lysosomal membrane	CC
GO:0005766	primary lysosome	CC
GO:0005768	endosome	CC
GO:0005770	late endosome	CC
GO:0005773	vacuole	CC
GO:0005774	vacuolar membrane	CC
GO:0005783	endoplasmic reticulum	CC
GO:0005794	Golgi apparatus	CC
GO:0005886	plasma membrane	CC
GO:0005887	plasma membrane	CC
GO:0006508	proteolysis	BP
GO:0006509	membrane protein ectodomain proteolysis	BP
GO:0006518	peptide metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006810	transport	BP
GO:0006887	exocytosis	BP
GO:0006897	endocytosis	BP
GO:0006909	phagocytosis	BP
GO:0006955	immune response	BP
GO:0006996	organelle organization	BP
GO:0007010	cytoskeleton organization	BP
GO:0007154	cell communication	BP
GO:0007165	signal transduction	BP
GO:0007166	cell surface receptor signaling pathway	BP
GO:0007219	Notch signaling pathway	BP
GO:0007220	Notch receptor processing	BP
GO:0007267	cell-cell signaling	BP
GO:0007275	multicellular organism development	BP
GO:0007389	pattern specification process	BP
GO:0007399	nervous system development	BP
GO:0007423	sensory organ development	BP
GO:0007610	behavior	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008233	peptidase activity	MF
GO:0008283	cell population proliferation	BP
GO:0008594	photoreceptor cell morphogenesis	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009790	embryo development	BP
GO:0009887	animal organ morphogenesis	BP
GO:0009987	cellular process	BP
GO:0010467	gene expression	BP
GO:0012505	endomembrane system	CC
GO:0012506	vesicle membrane	CC
GO:0016020	membrane	CC
GO:0016021	membrane	CC
GO:0016043	cellular component organization	BP
GO:0016192	vesicle-mediated transport	BP
GO:0016485	protein processing	BP
GO:0016787	hydrolase activity	MF
GO:0018991	oviposition	BP
GO:0019098	reproductive behavior	BP
GO:0019538	protein metabolic process	BP
GO:0022008	neurogenesis	BP
GO:0022414	reproductive process	BP
GO:0022603	regulation of anatomical structure morphogenesis	BP
GO:0023052	signaling	BP
GO:0030141	secretory granule	CC
GO:0030154	cell differentiation	BP
GO:0030182	neuron differentiation	BP
GO:0030587	sorocarp development	BP
GO:0030659	cytoplasmic vesicle membrane	CC
GO:0030667	secretory granule membrane	CC
GO:0031090	organelle membrane	CC
GO:0031154	culmination involved in sorocarp development	BP
GO:0031224	obsolete intrinsic component of membrane	CC
GO:0031226	obsolete intrinsic component of plasma membrane	CC
GO:0031293	membrane protein intracellular domain proteolysis	BP
GO:0031410	cytoplasmic vesicle	CC
GO:0031982	vesicle	CC
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032504	multicellular organism reproduction	BP
GO:0032940	secretion by cell	BP
GO:0032943	mononuclear cell proliferation	BP
GO:0032989	cellular component morphogenesis	BP
GO:0032991	protein-containing complex	CC
GO:0033619	membrane protein proteolysis	BP
GO:0034205	amyloid-beta formation	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0035295	tube development	BP
GO:0035333	Notch receptor processing, ligand-dependent	BP
GO:0035577	azurophil granule membrane	CC
GO:0036230	granulocyte activation	BP
GO:0042051	compound eye photoreceptor development	BP
GO:0042098	T cell proliferation	BP
GO:0042110	T cell activation	BP
GO:0042119	neutrophil activation	BP
GO:0042461	photoreceptor cell development	BP
GO:0042462	eye photoreceptor cell development	BP
GO:0042478	regulation of eye photoreceptor cell development	BP
GO:0042582	azurophil granule	CC
GO:0042592	homeostatic process	BP
GO:0042982	amyloid precursor protein metabolic process	BP
GO:0042987	amyloid precursor protein catabolic process	BP
GO:0043085	positive regulation of catalytic activity	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043299	leukocyte degranulation	BP
GO:0043312	neutrophil degranulation	BP
GO:0043603	amide metabolic process	BP
GO:0044093	positive regulation of molecular function	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044433	obsolete cytoplasmic vesicle part	CC
GO:0044437	obsolete vacuolar part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044459	obsolete plasma membrane part	CC
GO:0044464	obsolete cell part	CC
GO:0044671	sorocarp spore cell differentiation	BP
GO:0045055	regulated exocytosis	BP
GO:0045165	cell fate commitment	BP
GO:0045168	cell-cell signaling involved in cell fate commitment	BP
GO:0045314	regulation of compound eye photoreceptor development	BP
GO:0045321	leukocyte activation	BP
GO:0045463	R8 cell development	BP
GO:0045465	R8 cell differentiation	BP
GO:0045595	regulation of cell differentiation	BP
GO:0045664	regulation of neuron differentiation	BP
GO:0046331	lateral inhibition	BP
GO:0046530	photoreceptor cell differentiation	BP
GO:0046532	regulation of photoreceptor cell differentiation	BP
GO:0046649	lymphocyte activation	BP
GO:0046651	lymphocyte proliferation	BP
GO:0046903	secretion	BP
GO:0048468	cell development	BP
GO:0048513	animal organ development	BP
GO:0048565	digestive tract development	BP
GO:0048592	eye morphogenesis	BP
GO:0048598	embryonic morphogenesis	BP
GO:0048609	multicellular organismal reproductive process	BP
GO:0048666	neuron development	BP
GO:0048667	cell morphogenesis involved in neuron differentiation	BP
GO:0048699	generation of neurons	BP
GO:0048731	system development	BP
GO:0048749	compound eye development	BP
GO:0048837	sorocarp sorus development	BP
GO:0048856	anatomical structure development	BP
GO:0048869	cellular developmental process	BP
GO:0048872	homeostasis of number of cells	BP
GO:0050435	amyloid-beta metabolic process	BP
GO:0050673	epithelial cell proliferation	BP
GO:0050767	regulation of neurogenesis	BP
GO:0050789	regulation of biological process	BP
GO:0050790	regulation of catalytic activity	BP
GO:0050793	regulation of developmental process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0051239	regulation of multicellular organismal process	BP
GO:0051604	protein maturation	BP
GO:0051703	biological process involved in intraspecies interaction between organisms	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051716	cellular response to stimulus	BP
GO:0051960	regulation of nervous system development	BP
GO:0055037	recycling endosome	CC
GO:0055123	digestive system development	BP
GO:0060284	regulation of cell development	BP
GO:0060465	pharynx development	BP
GO:0060581	cell fate commitment involved in pattern specification	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0065009	regulation of molecular function	BP
GO:0070011	peptidase activity	MF
GO:0070661	leukocyte proliferation	BP
GO:0070765	gamma-secretase complex	CC
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0071944	cell periphery	CC
GO:0090596	sensory organ morphogenesis	BP
GO:0090702	socially cooperative development	BP
GO:0097708	intracellular vesicle	CC
GO:0098588	bounding membrane of organelle	CC
GO:0098657	import into cell	BP
GO:0098796	membrane protein complex	CC
GO:0098797	plasma membrane protein complex	CC
GO:0098805	membrane	CC
GO:0098852	lytic vacuole membrane	CC
GO:0099120	socially cooperative development	BP
GO:0099503	secretory vesicle	CC
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:2000026	regulation of multicellular organismal development	BP
GO:2000027	regulation of animal organ morphogenesis	BP