PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC105135400 View in Genome Browser
Position	NW_011499923.1:846429-848911 (-) 2482bp
Gene Type	gene
Gene Description (Protein Product)	Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins
Organism	Populus euphratica
Also AS	Potri.013G042100AT1G08780Potri.013G042100.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC105139281 Small nuclear ribonucleoprotein

gene-LOC105142316 Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain

gene-LOC105137156 Catalytic subunit of the peripheral V1 complex of vacuolar ATPase (V-ATPase). V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells

Regulatory gene

gene-LOC105107335 TCP family transcription factor

gene-LOC105107617 Growth-regulating factor

gene-LOC105107737 Transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0006457	protein folding	BP
GO:0008150	biological_process	BP
GO:0009987	cellular process	BP
GO:0016272	prefoldin complex	CC
GO:0032991	protein-containing complex	CC
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0051087	chaperone binding	MF