Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC105137726
View in Genome Browser
Position
NW_011499948.1:139905-142662 (+)
2757bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
Organism
Populus euphratica
Also AS Potri.017G053500AT1G80600Potri.017G053500.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105138683 N-carbamoylputrescine
gene-LOC105141256 Belongs to the ATCase OTCase family
gene-LOC105142203 Diaminopimelate decarboxylase
Regulatory gene
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107883 Dof zinc finger protein
gene-LOC105108074 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0003992 N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity MF
GO:0005488 binding MF
GO:0005507 copper ion binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006082 organic acid metabolic process BP
GO:0006520 amino acid metabolic process BP
GO:0006525 arginine metabolic process BP
GO:0006526 arginine biosynthetic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0007275 multicellular organism development BP
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008483 transaminase activity MF
GO:0008652 amino acid biosynthetic process BP
GO:0009058 biosynthetic process BP
GO:0009064 glutamine family amino acid metabolic process BP
GO:0009084 glutamine family amino acid biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009987 cellular process BP
GO:0016053 organic acid biosynthetic process BP
GO:0016740 transferase activity MF
GO:0016769 transferase activity, transferring nitrogenous groups MF
GO:0019752 carboxylic acid metabolic process BP
GO:0019842 vitamin binding MF
GO:0022622 root system development BP
GO:0030170 pyridoxal phosphate binding MF
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0036094 small molecule binding MF
GO:0042742 defense response to bacterium BP
GO:0042802 identical protein binding MF
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043169 cation binding MF
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043436 oxoacid metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046394 carboxylic acid biosynthetic process BP
GO:0046872 metal ion binding MF
GO:0046914 transition metal ion binding MF
GO:0048037 obsolete cofactor binding MF
GO:0048364 root development BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050662 obsolete coenzyme binding MF
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0070279 vitamin B6 binding MF
GO:0071704 organic substance metabolic process BP
GO:0080022 primary root development BP
GO:0097159 organic cyclic compound binding MF
GO:0098542 defense response to other organism BP
GO:0099402 plant organ development BP
GO:1901363 heterocyclic compound binding MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901605 alpha-amino acid metabolic process BP
GO:1901607 alpha-amino acid biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -