PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC105138068 View in Genome Browser
Position	NW_011499952.1:418492-422627 (+) 4135bp
Gene Type	gene
Gene Description (Protein Product)	D-cysteine desulfhydrase 2
Organism	Populus euphratica
Also AS	Potri.010G051200AT3G26115Potri.010G051200.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Regulatory gene

gene-LOC105107546 Dof zinc finger protein

gene-LOC105107624 AP2-like ethylene-responsive transcription factor

gene-LOC105107883 Dof zinc finger protein

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000096	sulfur amino acid metabolic process	BP
GO:0000098	sulfur amino acid catabolic process	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0006082	organic acid metabolic process	BP
GO:0006520	amino acid metabolic process	BP
GO:0006534	cysteine metabolic process	BP
GO:0006790	sulfur compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009063	amino acid catabolic process	BP
GO:0009069	serine family amino acid metabolic process	BP
GO:0009071	serine family amino acid catabolic process	BP
GO:0009093	cysteine catabolic process	BP
GO:0009987	cellular process	BP
GO:0016054	organic acid catabolic process	BP
GO:0016829	lyase activity	MF
GO:0016846	carbon-sulfur lyase activity	MF
GO:0019148	D-cysteine desulfhydrase activity	MF
GO:0019752	carboxylic acid metabolic process	BP
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044273	sulfur compound catabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0046395	carboxylic acid catabolic process	BP
GO:0071704	organic substance metabolic process	BP
GO:0080146	L-cysteine desulfhydrase activity	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1901605	alpha-amino acid metabolic process	BP
GO:1901606	alpha-amino acid catabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00270	Cysteine and methionine metabolism	Cysteine and methionine are sulfur-containing amino acids. Cysteine is synthesized from serine through different pathways in different organism groups. In bacteria and plants, cysteine is converted from serine (via acetylserine) by transfer of hydrogen sulfide [MD:M00021]. In animals, methionine-derived homocysteine is used as sulfur source and its condensation product with serine (cystathionine) is converted to cysteine [MD:M00338]. Cysteine is metabolized to pyruvate in multiple routes. Methionine is an essential amino acid, which animals cannot synthesize. In bacteria and plants, methionine is synthesized from aspartate [MD:M00017]. S-Adenosylmethionine (SAM), synthesized from methionine and ATP, is a methyl group donor in many important transfer reactions including DNA methylation for regulation of gene expression. SAM may also be used to regenerate methionine in the methionine salvage pathway [MD:M00034].