Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC105138731
View in Genome Browser
Position
NW_011499961.1:628434-632731 (-)
4297bp
Gene Type
gene
Gene Description (Protein Product)
Zn-finger in Ran binding protein and others
Organism
Populus euphratica
Also AS Potri.005G115100AT2G17975Potri.005G115100.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105142144 U3 small nucleolar RNA-associated protein
gene-LOC105142327 methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits
gene-LOC105142598 CCAAT enhancer-binding protein
Regulatory gene
gene-LOC105107409 Myb/SANT-like DNA-binding domain
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107883 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000082 G1/S transition of mitotic cell cycle BP
GO:0000226 microtubule cytoskeleton organization BP
GO:0000278 mitotic cell cycle BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005635 nuclear envelope CC
GO:0005642 annulate lamellae CC
GO:0005643 nuclear pore CC
GO:0005737 cytoplasm CC
GO:0005813 centrosome CC
GO:0005815 microtubule organizing center CC
GO:0005829 cytosol CC
GO:0005856 cytoskeleton CC
GO:0006403 RNA localization BP
GO:0006405 RNA export from nucleus BP
GO:0006406 mRNA export from nucleus BP
GO:0006464 protein modification process BP
GO:0006508 proteolysis BP
GO:0006511 ubiquitin-dependent protein catabolic process BP
GO:0006606 protein import into nucleus BP
GO:0006607 NLS-bearing protein import into nucleus BP
GO:0006611 protein export from nucleus BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006913 nucleocytoplasmic transport BP
GO:0006996 organelle organization BP
GO:0007010 cytoskeleton organization BP
GO:0007017 microtubule-based process BP
GO:0007049 cell cycle BP
GO:0007051 spindle organization BP
GO:0007088 regulation of mitotic nuclear division BP
GO:0007346 regulation of mitotic cell cycle BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008536 small GTPase binding MF
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0010564 regulation of cell cycle process BP
GO:0010638 positive regulation of organelle organization BP
GO:0012505 endomembrane system CC
GO:0015031 protein transport BP
GO:0015630 microtubule cytoskeleton CC
GO:0015833 peptide transport BP
GO:0015931 nucleobase-containing compound transport BP
GO:0016020 membrane CC
GO:0016032 viral process BP
GO:0016043 cellular component organization BP
GO:0016234 inclusion body CC
GO:0016740 transferase activity MF
GO:0016925 protein sumoylation BP
GO:0017016 small GTPase binding MF
GO:0017038 protein import BP
GO:0018193 peptidyl-amino acid modification BP
GO:0018205 peptidyl-lysine modification BP
GO:0019538 protein metabolic process BP
GO:0019787 ubiquitin-like protein transferase activity MF
GO:0019789 SUMO transferase activity MF
GO:0019899 enzyme binding MF
GO:0019941 modification-dependent protein catabolic process BP
GO:0022402 cell cycle process BP
GO:0030163 protein catabolic process BP
GO:0031090 organelle membrane CC
GO:0031267 small GTPase binding MF
GO:0031503 protein-containing complex localization BP
GO:0031965 nuclear membrane CC
GO:0031967 organelle envelope CC
GO:0031975 envelope CC
GO:0032446 protein modification by small protein conjugation BP
GO:0032886 regulation of microtubule-based process BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033043 regulation of organelle organization BP
GO:0033365 protein localization to organelle BP
GO:0034504 protein localization to nucleus BP
GO:0034613 protein localization BP
GO:0036211 protein modification process BP
GO:0042175 nuclear outer membrane-endoplasmic reticulum membrane network CC
GO:0042405 nuclear inclusion body CC
GO:0042886 amide transport BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0043632 modification-dependent macromolecule catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044257 protein catabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044265 cellular macromolecule catabolic process BP
GO:0044267 protein metabolic process BP
GO:0044403 biological process involved in symbiotic interaction BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044428 obsolete nuclear part CC
GO:0044430 obsolete cytoskeletal part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044614 nuclear pore cytoplasmic filaments CC
GO:0044615 nuclear pore nuclear basket CC
GO:0044770 cell cycle phase transition BP
GO:0044772 mitotic cell cycle phase transition BP
GO:0044843 cell cycle G1/S phase transition BP
GO:0045184 establishment of protein localization BP
GO:0045787 positive regulation of cell cycle BP
GO:0045840 positive regulation of mitotic nuclear division BP
GO:0045931 positive regulation of mitotic cell cycle BP
GO:0046602 regulation of mitotic centrosome separation BP
GO:0046604 positive regulation of mitotic centrosome separation BP
GO:0046605 regulation of centrosome cycle BP
GO:0046607 positive regulation of centrosome cycle BP
GO:0046907 intracellular transport BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0050657 nucleic acid transport BP
GO:0050658 RNA transport BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051020 GTPase binding MF
GO:0051028 mRNA transport BP
GO:0051128 regulation of cellular component organization BP
GO:0051130 positive regulation of cellular component organization BP
GO:0051168 nuclear export BP
GO:0051169 nuclear transport BP
GO:0051170 import into nucleus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051236 establishment of RNA localization BP
GO:0051493 regulation of cytoskeleton organization BP
GO:0051495 positive regulation of cytoskeleton organization BP
GO:0051603 proteolysis involved in protein catabolic process BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051642 centrosome localization BP
GO:0051649 establishment of localization in cell BP
GO:0051704 obsolete multi-organism process BP
GO:0051726 regulation of cell cycle BP
GO:0051783 regulation of nuclear division BP
GO:0051785 positive regulation of nuclear division BP
GO:0061842 microtubule organizing center localization BP
GO:0065007 biological regulation BP
GO:0070507 regulation of microtubule cytoskeleton organization BP
GO:0070647 protein modification by small protein conjugation or removal BP
GO:0070727 cellular macromolecule localization BP
GO:0071166 ribonucleoprotein complex localization BP
GO:0071426 obsolete ribonucleoprotein complex export from nucleus BP
GO:0071427 obsolete mRNA-containing ribonucleoprotein complex export from nucleus BP
GO:0071702 organic substance transport BP
GO:0071704 organic substance metabolic process BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072594 establishment of protein localization to organelle BP
GO:0090068 positive regulation of cell cycle process BP
GO:0098589 membrane CC
GO:0098805 membrane CC
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
GO:1903047 mitotic cell cycle process BP