Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC105139152
View in Genome Browser
Position
NW_011499969.1:245908-261774 (-)
15866bp
Gene Type
gene
Gene Description (Protein Product)
chromodomain-helicase-DNA-binding protein
Organism
Populus euphratica
Also AS Potri.001G253400AT2G13370Potri.001G253400.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105140515 High mobility group B protein
gene-LOC105141149 May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex
gene-LOC105140925 Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle
Regulatory gene
gene-LOC105107335 TCP family transcription factor
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107737 Transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005911 cell-cell junction CC
GO:0009506 plasmodesma CC
GO:0030054 cell junction CC
GO:0055044 symplast CC