Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC105139830
View in Genome Browser
Position
NW_011499981.1:406423-418390 (+)
11967bp
Gene Type
gene
Gene Description (Protein Product)
Secretory pathway protein Sec39
Organism
Populus euphratica
Also AS Potri.012G020000AT5G24350Potri.012G020000.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105141601 RINT-1 / TIP-1 family
gene-LOC105140697 Regulator of nonsense transcripts
gene-LOC105142106 Ras-related protein RABD1-like
Regulatory gene
gene-LOC105107172 NAC domain-containing protein
gene-LOC105107292 NAC transcription factor
gene-LOC105107295 NAC domain-containing protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0006508 proteolysis BP
GO:0006624 vacuolar protein processing BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0016485 protein processing BP
GO:0019538 protein metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0051604 protein maturation BP
GO:0071704 organic substance metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP