Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC105140001
View in Genome Browser
Position
NW_011499985.1:3489-5053 (-)
1564bp
Gene Type
gene
Gene Description (Protein Product)
Zinc finger protein CONSTANS-like
Organism
Populus euphratica
Also AS Potri.018G013800AT5G24930Potri.018G013800.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105142396 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
gene-LOC105142577 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
gene-LOC105141667 Belongs to the ATG8 family
Regulatory gene
gene-LOC105107464 B3 domain-containing transcription factor
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107871 B3 domain-containing protein Os01g0234100-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009909 regulation of flower development BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048580 regulation of post-embryonic development BP
GO:0048831 regulation of shoot system development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050896 response to stimulus BP
GO:0051239 regulation of multicellular organismal process BP
GO:0065007 biological regulation BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000241 regulation of reproductive process BP