PPGR - Gene Detail

Gene ID	gene-LOC105140477 View in Genome Browser
Position	NW_011499847.1:1473468-1477095 (+) 3627bp
Gene Type	gene
Gene Description (Protein Product)	DDB1- and CUL4-associated factor
Organism	Populus euphratica
Also AS	Potri.009G139000AT4G35140Potri.009G139000.v4.1

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	gene-LOC105141261 DNA damage-binding protein gene-LOC105142661 WD repeat-containing protein gene-LOC105141216 WD-40 repeat-containing protein
Regulatory gene	gene-LOC105107464 B3 domain-containing transcription factor gene-LOC105107546 Dof zinc finger protein gene-LOC105107871 B3 domain-containing protein Os01g0234100-like

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

GO Term	Description	GO Category
GO:0000151	ubiquitin ligase complex	CC
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005654	nucleoplasm	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005829	cytosol	CC
GO:0031461	cullin-RING ubiquitin ligase complex	CC
GO:0031974	membrane-enclosed lumen	CC
GO:0031981	nuclear lumen	CC
GO:0032991	protein-containing complex	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043233	organelle lumen	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044428	obsolete nuclear part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0070013	intracellular organelle lumen	CC
GO:0080008	Cul4-RING E3 ubiquitin ligase complex	CC
GO:1902494	catalytic complex	CC
GO:1990234	transferase complex	CC