Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC105140836
View in Genome Browser
Position
NW_011499847.1:1712461-1716220 (+)
3759bp
Gene Type
gene
Gene Description (Protein Product)
WD-40 repeat-containing protein
Organism
Populus euphratica
Also AS Potri.009G135100AT2G16780Potri.009G135100.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105141261 DNA damage-binding protein
gene-LOC105141480 E3 ubiquitin-protein ligase
gene-LOC105142385 Polycomb group protein
Regulatory gene
gene-LOC105107217 Transcription factor
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107624 AP2-like ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000151 ubiquitin ligase complex CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0031461 cullin-RING ubiquitin ligase complex CC
GO:0032991 protein-containing complex CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0080008 Cul4-RING E3 ubiquitin ligase complex CC
GO:1902494 catalytic complex CC
GO:1990234 transferase complex CC