Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC105140900
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Position
NW_011500001.1:570251-579206 (+)
8955bp
Gene Type
gene
Gene Description (Protein Product)
High-affinity nitrate transporter
Organism
Populus euphratica
Also AS Potri.015G085100AT5G50200Potri.015G085100.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105141708 High affinity nitrate transporter
gene-LOC105140904 high affinity nitrate transporter
gene-LOC105141240 Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Also essential during biosynthesis of the molybdenum cofactor. Acts by mediating the C-terminal thiocarboxylation of sulfur carriers URM1 and MOCS2A. Its N-terminus first activates URM1 and MOCS2A as acyl-adenylates (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 and MOCS2A to form thiocarboxylation (-COSH) of their C-terminus. The reaction probably involves hydrogen sulfide that is generated from the persulfide intermediate and that acts as nucleophile towards URM1 and MOCS2A. Subsequently, a transient disulfide bond is formed. Does not use thiosulfate as sulfur donor
Regulatory gene
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107883 Dof zinc finger protein
gene-LOC105108074 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006820 monoatomic anion transport BP
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0008509 monoatomic anion transmembrane transporter activity MF
GO:0009611 response to wounding BP
GO:0010035 response to inorganic substance BP
GO:0010167 response to nitrate BP
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015103 inorganic anion transmembrane transporter activity MF
GO:0015112 nitrate transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015698 inorganic anion transport BP
GO:0015706 nitrate transmembrane transport BP
GO:0016020 membrane CC
GO:0022857 transmembrane transporter activity MF
GO:0034220 monoatomic ion transmembrane transport BP
GO:0042221 response to chemical BP
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055085 transmembrane transport BP
GO:0071705 nitrogen compound transport BP
GO:0071944 cell periphery CC
GO:0098656 monoatomic anion transmembrane transport BP
GO:1901698 response to nitrogen compound BP
GO:1901700 response to oxygen-containing compound BP