Basic Information
Gene ID
gene-LOC105141043
Position
NW_011500004.1:436434-438681 (+)
2247bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the syntaxin family
Organism
Also AS Potri.006G202200AT3G11820Potri.006G202200.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105142588 Belongs to the synaptobrevin family
gene-LOC105142576 Belongs to the syntaxin family
gene-LOC105142284 Lethal(2) giant larvae protein homolog
Regulatory gene
gene-LOC105107464 B3 domain-containing transcription factor
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107650 homeobox-leucine zipper protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0000149 SNARE binding MF
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005794 Golgi apparatus CC
GO:0005802 trans-Golgi network CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0006605 protein targeting BP
GO:0006612 protein targeting to membrane BP
GO:0006810 transport BP
GO:0006833 water transport BP
GO:0006886 intracellular protein transport BP
GO:0006887 exocytosis BP
GO:0006906 vesicle fusion BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006996 organelle organization BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0009504 cell plate CC
GO:0009506 plasmodesma CC
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009620 response to fungus BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009737 response to abscisic acid BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010119 regulation of stomatal movement BP
GO:0010148 transpiration BP
GO:0012505 endomembrane system CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0022406 membrane docking BP
GO:0030054 cell junction CC
GO:0031201 SNARE complex CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0031347 regulation of defense response BP
GO:0031348 negative regulation of defense response BP
GO:0031984 organelle subcompartment CC
GO:0032507 maintenance of protein location in cell BP
GO:0032940 secretion by cell BP
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0033993 response to lipid BP
GO:0034613 protein localization BP
GO:0042044 fluid transport BP
GO:0042221 response to chemical BP
GO:0042886 amide transport BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043495 protein-membrane adaptor activity MF
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044431 obsolete Golgi apparatus part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0045184 establishment of protein localization BP
GO:0045185 maintenance of protein location BP
GO:0046903 secretion BP
GO:0046907 intracellular transport BP
GO:0048278 vesicle docking BP
GO:0048284 organelle fusion BP
GO:0048519 negative regulation of biological process BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0050832 defense response to fungus BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051235 maintenance of location BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051651 maintenance of location in cell BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0055044 symplast CC
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070727 cellular macromolecule localization BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0072657 protein localization to membrane BP
GO:0072658 maintenance of protein location in membrane BP
GO:0072659 protein localization to plasma membrane BP
GO:0072660 maintenance of protein location in plasma membrane BP
GO:0080134 regulation of response to stress BP
GO:0090150 establishment of protein localization to membrane BP
GO:0090174 organelle membrane fusion BP
GO:0097305 response to alcohol BP
GO:0098542 defense response to other organism BP
GO:0098791 Golgi apparatus subcompartment CC
GO:0098796 membrane protein complex CC
GO:0140056 organelle localization by membrane tethering BP
GO:1901700 response to oxygen-containing compound BP
GO:1990778 protein localization to cell periphery BP
KEGG Term Name Description
map04130 SNARE interactions in vesicular transport -