Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC105141046
View in Genome Browser
Position
NW_011500004.1:458612-463538 (-)
4926bp
Gene Type
gene
Gene Description (Protein Product)
Nuclear transcription factor Y subunit
Organism
Populus euphratica
Also AS Potri.006G201900AT5G06510Potri.006G201900.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105142462 Nuclear transcription factor Y subunit
gene-LOC105141474 Plastid-lipid-associated protein
gene-LOC105142317 ethylene-responsive transcription factor
Regulatory gene
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107624 AP2-like ethylene-responsive transcription factor
gene-LOC105107883 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005667 transcription regulator complex CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0008150 biological_process BP
GO:0009566 fertilization BP
GO:0009567 double fertilization forming a zygote and endosperm BP
GO:0009889 regulation of biosynthetic process BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0016602 CCAAT-binding factor complex CC
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019953 sexual reproduction BP
GO:0022414 reproductive process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0044703 multi-organism reproductive process BP
GO:0044798 transcription regulator complex CC
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051704 obsolete multi-organism process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0080090 regulation of primary metabolic process BP
GO:0090575 RNA polymerase II transcription regulator complex CC
GO:0140110 transcription regulator activity MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP