PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC105141592 View in Genome Browser
Position	NW_011500014.1:88409-93882 (-) 5473bp
Gene Type	gene
Gene Description (Protein Product)	Dehydrogenase
Organism	Populus euphratica
Also AS	Potri.015G064200AT5G62530Potri.015G064200.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC105142454 Aspartate aminotransferase

gene-LOC105142240 Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism

gene-LOC105142015 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of ATP and thus represents the only step of substrate- level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit

Regulatory gene

gene-LOC105107546 Dof zinc finger protein

gene-LOC105107656 ZINC FINGER protein

gene-LOC105107883 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0003842	1-pyrroline-5-carboxylate dehydrogenase activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0006082	organic acid metabolic process	BP
GO:0006520	amino acid metabolic process	BP
GO:0006536	glutamate metabolic process	BP
GO:0006560	proline metabolic process	BP
GO:0006562	proline catabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0006970	response to osmotic stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008270	zinc ion binding	MF
GO:0009056	catabolic process	BP
GO:0009063	amino acid catabolic process	BP
GO:0009064	glutamine family amino acid metabolic process	BP
GO:0009065	glutamine family amino acid catabolic process	BP
GO:0009507	chloroplast	CC
GO:0009536	plastid	CC
GO:0009628	response to abiotic stimulus	BP
GO:0009651	response to salt stress	BP
GO:0009987	cellular process	BP
GO:0010133	proline catabolic process to glutamate	BP
GO:0016054	organic acid catabolic process	BP
GO:0016491	oxidoreductase activity	MF
GO:0016645	oxidoreductase activity, acting on the CH-NH group of donors	MF
GO:0016646	oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor	MF
GO:0019752	carboxylic acid metabolic process	BP
GO:0043167	ion binding	MF
GO:0043169	cation binding	MF
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043436	oxoacid metabolic process	BP
GO:0043648	dicarboxylic acid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046395	carboxylic acid catabolic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046700	heterocycle catabolic process	BP
GO:0046872	metal ion binding	MF
GO:0046914	transition metal ion binding	MF
GO:0050896	response to stimulus	BP
GO:0050897	cobalt ion binding	MF
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071704	organic substance metabolic process	BP
GO:0072593	reactive oxygen species metabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901361	organic cyclic compound catabolic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1901605	alpha-amino acid metabolic process	BP
GO:1901606	alpha-amino acid catabolic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00330	Arginine and proline metabolism	-
map00250	Alanine, aspartate and glutamate metabolism	-