Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC105142465
View in Genome Browser
Position
NW_011500031.1:48590-52107 (-)
3517bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the peroxidase family
Organism
Populus euphratica
Also AS Potri.016G084800AT3G09640Potri.016G084800.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC105142755 Belongs to the thioredoxin family
gene-LOC105142577 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked
gene-LOC105142812 Glutathione synthetase
Regulatory gene
gene-LOC105107546 Dof zinc finger protein
gene-LOC105107883 Dof zinc finger protein
gene-LOC105108074 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000302 response to reactive oxygen species BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004130 cytochrome-c peroxidase activity MF
GO:0004601 peroxidase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006950 response to stress BP
GO:0006979 response to oxidative stress BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009636 response to toxic substance BP
GO:0009987 cellular process BP
GO:0016209 antioxidant activity MF
GO:0016491 oxidoreductase activity MF
GO:0016684 oxidoreductase activity, acting on peroxide as acceptor MF
GO:0016688 L-ascorbate peroxidase activity MF
GO:0016999 antibiotic metabolic process BP
GO:0017001 antibiotic catabolic process BP
GO:0017144 xenobiotic metabolic process BP
GO:0033554 cellular response to stress BP
GO:0034599 cellular response to oxidative stress BP
GO:0042221 response to chemical BP
GO:0042737 xenobiotic catabolic process BP
GO:0042743 hydrogen peroxide metabolic process BP
GO:0042744 hydrogen peroxide catabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044237 cellular metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051187 obsolete cofactor catabolic process BP
GO:0051716 cellular response to stimulus BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0070887 cellular response to chemical stimulus BP
GO:0072593 reactive oxygen species metabolic process BP
GO:0097237 cellular response to toxic substance BP
GO:0098754 detoxification BP
GO:0098869 cellular oxidant detoxification BP
GO:1901700 response to oxygen-containing compound BP
GO:1990748 cellular detoxification BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00480 Glutathione metabolism -
map00053 Ascorbate and aldarate metabolism -