PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC105142565 View in Genome Browser
Position	NW_011500033.1:309801-314785 (-) 4984bp
Gene Type	gene
Gene Description (Protein Product)	assists the folding of proteins upon ATP hydrolysis
Organism	Populus euphratica
Also AS	Potri.006G128600AT5G20890Potri.006G128600.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC105142610 The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH

gene-LOC105142601 Required for the assembly and or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits

gene-LOC105142577 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked

Regulatory gene

gene-LOC105107217 Transcription factor

gene-LOC105107546 Dof zinc finger protein

gene-LOC105107713 Ethylene-responsive transcription factor ERF022-like

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0005832	chaperonin-containing T-complex	CC
GO:0005886	plasma membrane	CC
GO:0006457	protein folding	BP
GO:0006458	'de novo' protein folding	BP
GO:0008150	biological_process	BP
GO:0009987	cellular process	BP
GO:0016020	membrane	CC
GO:0030312	external encapsulating structure	CC
GO:0031224	obsolete intrinsic component of membrane	CC
GO:0031225	obsolete anchored component of membrane	CC
GO:0031226	obsolete intrinsic component of plasma membrane	CC
GO:0032991	protein-containing complex	CC
GO:0044183	protein folding chaperone	MF
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044445	obsolete cytosolic part	CC
GO:0044459	obsolete plasma membrane part	CC
GO:0044464	obsolete cell part	CC
GO:0046658	obsolete anchored component of plasma membrane	CC
GO:0051082	unfolded protein binding	MF
GO:0061077	chaperone-mediated protein folding	BP
GO:0071944	cell periphery	CC
GO:0101031	chaperone complex	CC