Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_115.1099.g
View in Genome Browser
Position
scaffold115:81028-90992 (-)
9964bp
Gene Type
gene
Gene Description (Protein Product)
mediator of RNA polymerase II transcription subunit
Organism
Populus pruinosa
Also AS Potri.002G215600AT2G48110Potri.002G215600.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_6230.26086.g mediator of RNA polymerase II transcription subunit
Ppr_11805.1262.g Small RNA degrading nuclease
Ppr_1559.6824.g mediator of RNA polymerase II transcription subunit
Regulatory gene
Ppr_11046.812.g Dof zinc finger protein
Ppr_11896.1284.g ZINC FINGER protein
Ppr_11896.1292.g Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0006725 cellular aromatic compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009698 phenylpropanoid metabolic process BP
GO:0009987 cellular process BP
GO:0016020 membrane CC
GO:0016592 mediator complex CC
GO:0019222 regulation of metabolic process BP
GO:0019748 secondary metabolic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043455 regulation of secondary metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044451 obsolete nucleoplasm part CC
GO:0044464 obsolete cell part CC
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0071704 organic substance metabolic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:2000762 regulation of phenylpropanoid metabolic process BP