Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_139121.5083.g
View in Genome Browser
Position
scaffold139121:243963-267257 (+)
23294bp
Gene Type
gene
Gene Description (Protein Product)
E3 ubiquitin-protein ligase
Organism
Populus pruinosa
Also AS Potri.019G126000AT5G58410Potri.019G126000.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_779.31799.g Nuclear export mediator factor
Ppr_190.10116.g Belongs to the universal ribosomal protein uL3 family
Ppr_422.20624.g Belongs to the universal ribosomal protein uL3 family
Regulatory gene
Ppr_1043.374.g zinc finger
Ppr_1179.1201.g ZINC FINGER protein
Ppr_119221.1313.g ZINC FINGER protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC