Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Ppr_1614.7408.g
View in Genome Browser
Position
scaffold1614:282914-291536 (+)
8622bp
Gene Type
gene
Gene Description (Protein Product)
cytosolic
Organism
Populus pruinosa
Also AS Potri.010G184300AT3G11040Potri.010G184300.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Ppr_2751.15983.g Encoded by
Ppr_2837.16076.g Lysosomal
Ppr_6429.26629.g Mannosylglycoprotein
Regulatory gene
Ppr_10365.259.g B3 DNA binding domain
Ppr_10365.260.g B3 DNA binding domain
Ppr_10365.261.g B3 DNA binding domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000270 peptidoglycan metabolic process BP
GO:0000323 lytic vacuole CC
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0004563 beta-N-acetylhexosaminidase activity MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005615 extracellular space CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005764 lysosome CC
GO:0005773 vacuole CC
GO:0005975 carbohydrate metabolic process BP
GO:0006022 aminoglycan metabolic process BP
GO:0006026 aminoglycan catabolic process BP
GO:0006027 glycosaminoglycan catabolic process BP
GO:0006464 protein modification process BP
GO:0006491 N-glycan processing BP
GO:0006517 protein deglycosylation BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009100 glycoprotein metabolic process BP
GO:0009253 peptidoglycan catabolic process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009987 cellular process BP
GO:0015929 hexosaminidase activity MF
GO:0016052 carbohydrate catabolic process BP
GO:0016231 beta-N-acetylglucosaminidase activity MF
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0019538 protein metabolic process BP
GO:0030203 glycosaminoglycan metabolic process BP
GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity MF
GO:0035821 modulation of process of another organism BP
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0044033 obsolete multi-organism metabolic process BP
GO:0044035 obsolete multi-organism catabolic process BP
GO:0044040 obsolete multi-organism carbohydrate metabolic process BP
GO:0044041 obsolete multi-organism carbohydrate catabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044278 cell wall disruption in another organism BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044421 obsolete extracellular region part CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0051672 obsolete catabolism by organism of cell wall peptidoglycan in other organism BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0071704 organic substance metabolic process BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901136 carbohydrate derivative catabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901565 organonitrogen compound catabolic process BP
GO:1901575 organic substance catabolic process BP
KEGG Term Name Description
map00511 Other glycan degradation -